Package: kwb.geosalz 0.7.0

Michael Rustler

kwb.geosalz: R Package for Documenting Workflow Used in Project "geosalz"

R Package for Documenting Workflow Used in Project "geosalz".

Authors:Michael Rustler [aut, cre], Hauke Sonnenberg [ctb], Christoph Sprenger [ctb], GeoSalz [fnd], Kompetenzzentrum Wasser Berlin gGmbH [cph]

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kwb.geosalz.pdf |kwb.geosalz.html✨
kwb.geosalz/json (API)
NEWS

# Install 'kwb.geosalz' in R:
install.packages('kwb.geosalz', repos = c('https://kwb-r.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/kwb-r/kwb.geosalz/issues

On CRAN:

data-cleaningdata-importdata-visualisationexcelproject-fakinproject-geosalzspreadsheets

2.30 score 3 scripts 44 exports 117 dependencies

Last updated 8 months agofrom:f4c7d826e4. Checks:ERROR: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesFAILOct 26 2024
R-4.5-winWARNINGOct 26 2024
R-4.5-linuxWARNINGOct 26 2024
R-4.4-winWARNINGOct 26 2024
R-4.4-macWARNINGOct 26 2024
R-4.3-winWARNINGOct 26 2024
R-4.3-macWARNINGOct 26 2024

Exports:%>%add_para_metadataadd_site_metadatacolumn_pattern_gather_ignorecolumn_pattern_gather_ignore_cleanconvert_phreeqc_input_to_wideconvert_to_sfconvert_xls_as_xlsxcopy_lookup_para_filecopy_xlsx_filescreate_emshoff91_importcreate_sftp_connectiondownload_measurementchains_dataemshoff91_list_to_dfemshoff91_remap_valuesget_excelcnv_exeget_foerdermengenget_foerdermengen_gal_friget_measurement_chain_data_on_cloudget_measurementchains_filesget_measurementchains_metadataget_measurmentchains_data_statsget_pandoc_infoget_parameters_metaget_phreeqc_dataget_site_idimport_labororder_measurement_chain_dataplot_measurementchain_and_well_operationplot_measurementchainsprepare_phreeqc_inputread_bwb_dataread_bwb_header1_metaread_bwb_header2read_bwb_header4read_emshoff91_odsread_isotopesread_lab_bwbread_master_dataread_measurementchains_dataread_multiple_emshoff91_odsreplace_nanb_with_nastop_if_duplicated_samples_foundwrite_measurementchains_data

Dependencies:archiveaskpassbase64encbitbit64bitopsbslibcachemcellrangerclassclassIntclicliprcolorspacecowplotcpp11crayoncurldata.tableDBIdigestdplyre1071evaluatefansifarverfastmapfontawesomeforcatsfsgenericsgeosalz.phreeqcggplot2gluegridExtragtablehighrhmshtmltoolshttrisobandjanitorjquerylibjsonliteKernSmoothknitrkwb.basekwb.datetimekwb.dbkwb.eventkwb.filekwb.nextcloudkwb.plotkwb.utilslabelinglatticelifecyclelubridatemagrittrMASSMatrixmemoisemgcvmimemintymunsellnlmeodbc32opensslpbdZMQpillarpkgconfigprettyunitsprogressproxypurrrr2rR6rappdirsRColorBrewerRcppRCurlreadODSreadrreadxlrematchrlangrmarkdownRODBCs2sassscalessfsftpsnakecasestringistringrsystibbletidyrtidyselecttimechangetinytextzdbunitsutf8vctrsviridisLitevroomwithrwkxfunxml2xtsyamlzipzoo

Readme and manuals

Help Manual

Help pageTopics
add_para_metadataadd_para_metadata
add_site_metadataadd_site_metadata
Check if all strings are not emptyall_defined
Helper function: cat_green_bold_0cat_green_bold_0
Helper function: cat_red_bold_0cat_red_bold_0
Helper function: column_pattern_gather_ignorecolumn_pattern_gather_ignore
Helper function: column_pattern_gather_ignore_cleancolumn_pattern_gather_ignore_clean
Convert PhreeqC input to "wide" formatconvert_phreeqc_input_to_wide
Convert to SFconvert_to_sf
Convert xls to xlsxconvert_xls_as_xlsx
Helper function: convert_xls_to_xlsxconvert_xls_to_xlsx
Helper function: copy_lookup_para_filecopy_lookup_para_file
Helper function: copy_xlsx_filescopy_xlsx_files
Create EMSHOFF91 Import Data Framecreate_emshoff91_import
Measurement Chains: Create an SFTP Connectioncreate_sftp_connection
Helper function: delete_registrydelete_registry
Measurement Chains: download datadownload_measurementchains_data
Emshoff 91: list to data frameemshoff91_list_to_df
Emshoff 91: remap values from imported tibbleemshoff91_remap_values
Helper function: gather_and_join_1gather_and_join_1
Helper function: gather_and_join_2gather_and_join_2
Helper function: get_excelcnv_exeget_excelcnv_exe
get_foerdermengenget_foerdermengen
Get Abtraction of Friedrichshagen Well Galleriesget_foerdermengen_gal_fri
Get Measurement Chain Data on KWB Cloudget_measurement_chain_data_on_cloud
Measurement Chains: Get Tidied Files Metadataget_measurementchains_files
Measurement Chains: Get Metadataget_measurementchains_metadata
Measurement Chains: get statistics for dataget_measurmentchains_data_stats
Helper function: get_meta_sheet_or_stopget_meta_sheet_or_stop
Get Information on Pandocget_pandoc_info
get_parameters_metaget_parameters_meta
Get PhreeqC dataget_phreeqc_data
Helper function: get_site_idget_site_id
import_laborimport_labor
Order Measurement Chain Dataorder_measurement_chain_data
Plot measurementchain and well operation in combined plotplot_measurementchain_and_well_operation
Measurement Chains: plottplot_measurementchains
Prepare PhreeqC inputprepare_phreeqc_input
Helper function: print_datatype_info_ifprint_datatype_info_if
Import: read_bwb_dataread_bwb_data
Import: read_bwb_header1_metaread_bwb_header1_meta
Import: read_bwb_header2read_bwb_header2
Import: read_bwb_header4read_bwb_header4
Reads a Single EMSHOFF 91 ODS File into Tibbleread_emshoff91_ods
Read Isotopesread_isotopes
Read Lab BWBread_lab_bwb
Read Master Dataread_master_data
Measurement Chains: read csv data from multiple filesread_measurementchains_data
Reads Multiple EMSHOFF 91 ODS Files into Listread_multiple_emshoff91_ods
Replace n.a. (not available) and n.b. (not determined) from lab data with NAreplace_nanb_with_na
Helper function: safe_office_foldersafe_office_folder
Helper function: stop if duplicated sample ids are foundstop_if_duplicated_samples_found
Helper function: stop_on_missing_or_inform_on_extra_sheetsstop_on_missing_or_inform_on_extra_sheets
Helper function: to_full_metadata2to_full_metadata_2
Helper function: to_full_metadata_4to_full_metadata_4
Measurement Chains: write csv datawrite_measurementchains_data